What isn't a Pseudomonad: The Importance of Nomenclature in Bacterial Classification
Identifieur interne : 004E55 ( Main/Exploration ); précédent : 004E54; suivant : 004E56What isn't a Pseudomonad: The Importance of Nomenclature in Bacterial Classification
Auteurs : Carl R. Woese [États-Unis] ; Paul Blanz [États-Unis, Allemagne] ; Christine M. Hahn [États-Unis]Source :
- Systematic and Applied Microbiology [ 0723-2020 ] ; 1984.
Descripteurs français
- Wicri :
- topic : Classification.
English descriptors
- KwdEn :
- Teeft :
- Acidovorans, Additional occurrences, Alcaligenes, Alcaligenes eutrophus, Ancestral characters, Aquaspirillum gracile, Atcc, Bacteria, Bacterial phylogeny, Catalog, Cepacia, Comamonas terrigena, Cost effectiveness, Determinative classification, Diminuta, Diminuta catalog, Doudoroff, Escherichia coli, Fluorescent pseudomonad group, Fluorescent pseudomonads, Full sequencing, Genus pseudomonas, Hybridization, Maltophilia, Natural relationships, Oligonucleotide, Oligonucleotide catalogs, Oligonucleotide signature, Oligonucleotide signatures, Oligonucleotides, Organism, Other bacteria, Other catalog, Other gram, Palleroni, Photosynthetic bacteria, Phylogenetic, Phylogenetic classification, Phylogenetic relationships, Phylogeny, Present definition, Present study, Pseudomonad, Pseudomonad groups, Pseudomonads table, Pseudomonas, Purple bacteria, Purple photosynthetic bacteria, Rill, Rrna, Sequencing, Spiral bacteria, Stutzeri atcc, Subgroup, Unweighted pair group analysis, Various groups, Woese, Xanthomonas campestris.
Abstract
Summary: A variety of pseudomonad species have been characterized by the technique of oligonucleotide cataloging of 16S ribosomal RNA in order to determine their genealogical relationships to one another and to other Gram negative bacteria. By this criterion, pseudomonads are shown to comprise five distinct groupings (as originally defined by Palleroni and co-workers). However, none of the five groupings so defined is phylogenetically comprehensive - i.e., none comprises exclusively pseudomonad phenotypes. Pseudomonads are intermingled phylogenetically with a variety of other Gram negative phenotypes - purple photosynthetic bacteria, spiral bacteria, alcaligenes species, etc.
Url:
DOI: 10.1016/S0723-2020(84)80019-3
Affiliations:
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Woese, Dept. of Genetics and Development, University of Illinois, 515 Morrill Hall, 505 South Goodwin Avenue, Urbana, Illinois 61801 (217) 333-9369</wicri:regionArea><wicri:noRegion>Illinois 61801 (217) 333-9369</wicri:noRegion></affiliation></author><author><name sortKey="Blanz, Paul" sort="Blanz, Paul" uniqKey="Blanz P" first="Paul" last="Blanz">Paul Blanz</name><affiliation wicri:level="1"><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Genetics and Development, University of Illinois, Urbana, Illinois 61801</wicri:regionArea><wicri:noRegion>Illinois 61801</wicri:noRegion></affiliation><affiliation wicri:level="1"><country xml:lang="fr">Allemagne</country><wicri:regionArea>Permanent Address: Lehrstuhl für Spezielle Botanik, Universität Tübingen, 7400 Tübingen</wicri:regionArea><wicri:noRegion>7400 Tübingen</wicri:noRegion><wicri:noRegion>7400 Tübingen</wicri:noRegion></affiliation></author><author><name sortKey="Hahn, Christine M" sort="Hahn, Christine M" uniqKey="Hahn C" first="Christine M." last="Hahn">Christine M. Hahn</name><affiliation wicri:level="1"><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Genetics and Development, University of Illinois, Urbana, Illinois 61801</wicri:regionArea><wicri:noRegion>Illinois 61801</wicri:noRegion></affiliation></author></analytic><monogr></monogr><series><title level="j">Systematic and Applied Microbiology</title><title level="j" type="abbrev">SYAPM</title><idno type="ISSN">0723-2020</idno><imprint><publisher>ELSEVIER</publisher><date type="published" when="1984">1984</date><biblScope unit="volume">5</biblScope><biblScope unit="issue">2</biblScope><biblScope unit="page" from="179">179</biblScope><biblScope unit="page" to="195">195</biblScope></imprint><idno type="ISSN">0723-2020</idno></series></biblStruct></sourceDesc><seriesStmt><idno type="ISSN">0723-2020</idno></seriesStmt></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Classification</term><term>Evolution</term><term>Gram-negative bacteria</term><term>Oligonucleotide catalog</term><term>Pseudomonas</term></keywords><keywords scheme="Teeft" xml:lang="en"><term>Acidovorans</term><term>Additional occurrences</term><term>Alcaligenes</term><term>Alcaligenes eutrophus</term><term>Ancestral characters</term><term>Aquaspirillum gracile</term><term>Atcc</term><term>Bacteria</term><term>Bacterial phylogeny</term><term>Catalog</term><term>Cepacia</term><term>Comamonas terrigena</term><term>Cost effectiveness</term><term>Determinative classification</term><term>Diminuta</term><term>Diminuta catalog</term><term>Doudoroff</term><term>Escherichia coli</term><term>Fluorescent pseudomonad group</term><term>Fluorescent pseudomonads</term><term>Full sequencing</term><term>Genus pseudomonas</term><term>Hybridization</term><term>Maltophilia</term><term>Natural relationships</term><term>Oligonucleotide</term><term>Oligonucleotide catalogs</term><term>Oligonucleotide signature</term><term>Oligonucleotide signatures</term><term>Oligonucleotides</term><term>Organism</term><term>Other bacteria</term><term>Other catalog</term><term>Other gram</term><term>Palleroni</term><term>Photosynthetic bacteria</term><term>Phylogenetic</term><term>Phylogenetic classification</term><term>Phylogenetic relationships</term><term>Phylogeny</term><term>Present definition</term><term>Present study</term><term>Pseudomonad</term><term>Pseudomonad groups</term><term>Pseudomonads table</term><term>Pseudomonas</term><term>Purple bacteria</term><term>Purple photosynthetic bacteria</term><term>Rill</term><term>Rrna</term><term>Sequencing</term><term>Spiral bacteria</term><term>Stutzeri atcc</term><term>Subgroup</term><term>Unweighted pair group analysis</term><term>Various groups</term><term>Woese</term><term>Xanthomonas campestris</term></keywords><keywords scheme="Wicri" type="topic" xml:lang="fr"><term>Classification</term></keywords></textClass><langUsage><language ident="en">en</language></langUsage></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Summary: A variety of pseudomonad species have been characterized by the technique of oligonucleotide cataloging of 16S ribosomal RNA in order to determine their genealogical relationships to one another and to other Gram negative bacteria. By this criterion, pseudomonads are shown to comprise five distinct groupings (as originally defined by Palleroni and co-workers). However, none of the five groupings so defined is phylogenetically comprehensive - i.e., none comprises exclusively pseudomonad phenotypes. Pseudomonads are intermingled phylogenetically with a variety of other Gram negative phenotypes - purple photosynthetic bacteria, spiral bacteria, alcaligenes species, etc.</div></front></TEI><affiliations><list><country><li>Allemagne</li><li>États-Unis</li></country></list><tree><country name="États-Unis"><noRegion><name sortKey="Woese, Carl R" sort="Woese, Carl R" uniqKey="Woese C" first="Carl R." last="Woese">Carl R. Woese</name></noRegion><name sortKey="Blanz, Paul" sort="Blanz, Paul" uniqKey="Blanz P" first="Paul" last="Blanz">Paul Blanz</name><name sortKey="Hahn, Christine M" sort="Hahn, Christine M" uniqKey="Hahn C" first="Christine M." last="Hahn">Christine M. Hahn</name><name sortKey="Woese, Carl R" sort="Woese, Carl R" uniqKey="Woese C" first="Carl R." last="Woese">Carl R. Woese</name></country><country name="Allemagne"><noRegion><name sortKey="Blanz, Paul" sort="Blanz, Paul" uniqKey="Blanz P" first="Paul" last="Blanz">Paul Blanz</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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